Proper way to use JQuery when using MasterPages in ASP.NET?

I have no issues when doing using JQuery in a aspx page without a masterpage, but when I try to use it in pages that have a masterpage, it doesn’t work, so I end up putting the jquery files and other script files in the page instead of the master. Now if I have 10 pages, I am doing this for all 10, which I know is incorrect. In the sample masterpage below, where would I put my script files.